Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891510.1_cds_XP_016446305.1_41177
CDS Infomation

[gene=LOC107771456] [db_xref=GeneID:107771456] [protein=BTB/POZ domain-containing protein DOT3-like isoform X2] [protein_id=XP_016446305.1] [location=complement(join(56446..56814,57768..57896,57981..58251,58670..59562,60312..60381,60486..60628))] [gbkey=CDS]
Sequence

ATGCAGAAATTGATTCAACTTGATCAGCTGGAGAACACTGGAGATGTATCTGATGACACT
CGCCAACTTCATGATCAACGTATAGTTGTCCCGACCATCCTCAATCAAATAGCTGATGGA
TTTGAGAAGAAAGAACAGTCATGGTTTGCTACTTCTCAGCTTCCAAGTGATTTATCAATT
CGAGTTGACGACATCACCTTCTATGTTCACAAGTATCCGCTGGTTGCAAGGTGTGCTTAC
CTAAGAGAAATCGAATTTCAGCCTCAAAATTCACACTTAGGTTATGACCTCAAGCTCGAA
AAATTTCCAGGCGGATCAGAAAACTTCGAGATGATTCTAAAGTTCTGTTACGGCCTACCA
ATAAGCTTGAACCCTGGAAATGTAGCAGCATTAAGATGTGGATCAGAATTCCTAGAAATG
ACAGAAGCAATGGAAGAAGGAAACCTGATTTCAACAACAGAAGCATTCTTCACATTTGTA
GTCCTTTCGTCGTGGAACGATTCCATCACCGTCCTTAAATCATGCGAAATGCTATCTCCG
TGGGCAGAAAACCTACAAATTGTGAGAAGATGTTGTGACTCAATTGGTTGGAAAATCTTC
AGAAAAAATTCAACAGAGGAAATAACGAACGAAGGAACCTGGTGGTTCGATGATATTGCC
ACTCTCCGTATTAACTTCTTCTTGAGAATTATTACAGCAATAAGAGTAAAAGGAATCAAA
CCAGAAATCATTGGTTCATGTATCATGCATTATGGAGAGAAGTGGTTGCCAAATATGAAT
AGTGAAACGAAAGGAACGGATAAATATGGTAATATAAGAAATGACTCGCAATGGAGTATC
ACCAGTGGGAGAATGCAAGAAAAAAGCATTGGACAGAATAATAAGGAACAAAGAATAATA
ATAGAGAGCTTGATTAGTATACTACCTCCTCAAAAGGAAGCTGTTTCTTGCAAGTTTCTT
CTACGACTGTTAAAGATGGCGATGCTGTATGCTGCATCACCAGCTCTGATTTCAGAGCTT
GAGAAAAGAATCGGCATGGTGTTTGAAAACGCCGGTCTGAATGACCTTTTGATCCCTAGT
TATGCAGTAAGTGAACAAACAATAAATTCAACTGAAGAACAGACTATCTACAATATCGAT
GTGGTGCAAAGGATATTGGATTATTTCTTGCTATATGAACAGCAAAAACTGCAGCAACAA
GAAATGAAGTCGTCGACAACAGTGAATATCAGTAAACTGGTTGACAGCTACCTAGCAGAA
ATTGCAAGAGATCACAATGTATCTATCACAAAGTTCCAAGTCTTAGCTGAATCTCTGCCT
CGACACATTCGGACTTGTCATGATGGACTCTACAGAGCCATCGATACATACCTTAAGACT
CATCCTTCACTATCAGAACATGATCGCCGAAGGCTATGCAAGATCATGGACAGCGAAAAA
TTGTCACTTGACGCATGTATGCATGCAGCTCAAAACGAAAGGTTGCCCCTGAGAATCGTT
ATCCAGGTTTTGCTCTCGGAGCAAGTGAAGATGAGGGCTGCAGTACAAGGGAAAGATATT
ATAGCAAGTGATGACTATAACTTAGACAAAGAAAATAATTGGTTATCTACAAAGAAGGAG
GTCAAGTCCCTTAAAGAAGAACTTGAAAAAGTGAAGATACAAATGACAGGTCTTCAGAGG
GATTACTCTGAGCTGCAACAAGAATATGAAAAGTTAAACAACAAGCCTAGAATTCCATGG
ACATCTGGATGGAGGAAGATAAAAAAGTCTGCTCTTTTTAATAGAAAAATGGTCGAGGAA
GAAACTCAAGAAGGCGAAAATAGAGTTAAACCAGGCCGCAGAGGAAGCATCAGTCGAAGG
CAGTCCATATCTTAA

Peptide Sequence

PEP ID

XP_016446305.1
PEP Infomation

PREDICTED: BTB/POZ domain-containing protein DOT3-like isoform X2 [Nicotiana tabacum]
Sequence

MQKLIQLDQLENTGDVSDDTRQLHDQRIVVPTILNQIADGFEKKEQSWFATSQLPSDLSI
RVDDITFYVHKYPLVARCAYLREIEFQPQNSHLGYDLKLEKFPGGSENFEMILKFCYGLP
ISLNPGNVAALRCGSEFLEMTEAMEEGNLISTTEAFFTFVVLSSWNDSITVLKSCEMLSP
WAENLQIVRRCCDSIGWKIFRKNSTEEITNEGTWWFDDIATLRINFFLRIITAIRVKGIK
PEIIGSCIMHYGEKWLPNMNSETKGTDKYGNIRNDSQWSITSGRMQEKSIGQNNKEQRII
IESLISILPPQKEAVSCKFLLRLLKMAMLYAASPALISELEKRIGMVFENAGLNDLLIPS
YAVSEQTINSTEEQTIYNIDVVQRILDYFLLYEQQKLQQQEMKSSTTVNISKLVDSYLAE
IARDHNVSITKFQVLAESLPRHIRTCHDGLYRAIDTYLKTHPSLSEHDRRRLCKIMDSEK
LSLDACMHAAQNERLPLRIVIQVLLSEQVKMRAAVQGKDIIASDDYNLDKENNWLSTKKE
VKSLKEELEKVKIQMTGLQRDYSELQQEYEKLNNKPRIPWTSGWRKIKKSALFNRKMVEE
ETQEGENRVKPGRRGSISRRQSIS

Transcript Sequence

Gene sequence data has not been registered.